Filters
This instance of LAPIS supports the following sequence filters:
Name | Type | Description |
---|---|---|
primaryKey | string (primary key) | Filters the "primaryKey" column" with exact match |
primaryKey.regex | string | Filters the "primaryKey" column using a regular expression, see string search |
date | date | Filters the "date" column" with exact match |
dateFrom | date | Filters the "date" column (including the boundary) |
dateTo | date | Filters the "date" column (including the boundary) |
region | string | Filters the "region" column" with exact match |
country | string | Filters the "country" column" with exact match |
country.regex | string | Filters the "country" column using a regular expression, see string search |
pangoLineage | pango_lineage | Filters the "pangoLineage" column for a pango lineage, see pango lineage query |
division | string | Filters the "division" column" with exact match |
division.regex | string | Filters the "division" column using a regular expression, see string search |
age | int | Filters the "age" column" with exact match |
ageFrom | int | Filters the "age" column (including the boundary) |
ageTo | int | Filters the "age" column (including the boundary) |
qc_value | float | Filters the "qc_value" column" with exact match |
qc_valueFrom | float | Filters the "qc_value" column (including the boundary) |
qc_valueTo | float | Filters the "qc_value" column (including the boundary) |
test_boolean_column | boolean | Filters the "test_boolean_column" column for a boolean value |
nucleotideMutations | list of strings | Filters for nucleotide mutations, see mutation filters |
aminoAcidMutations | list of strings | Filters for amino acid mutations, see mutation filters |
nucleotideInsertions | list of strings | In the format ins_false{'<position>:<insertion>'}. Example: ins_100:AGG |
aminoAcidInsertions | list of strings | In the format ins_<sequenceName>:<position><insertion>. Example: ins_E:100:DEF |