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Filters

This instance of LAPIS supports the following sequence filters:

Name Type Description
primaryKey string (primary key) Filters the "primaryKey" column" with exact match
primaryKey.regex string Filters the "primaryKey" column using a regular expression, see string search
date date Filters the "date" column" with exact match
dateFrom date Filters the "date" column (including the boundary)
dateTo date Filters the "date" column (including the boundary)
region string Filters the "region" column" with exact match
country string Filters the "country" column" with exact match
country.regex string Filters the "country" column using a regular expression, see string search
pangoLineage pango_lineage Filters the "pangoLineage" column for a pango lineage, see pango lineage query
division string Filters the "division" column" with exact match
division.regex string Filters the "division" column using a regular expression, see string search
age int Filters the "age" column" with exact match
ageFrom int Filters the "age" column (including the boundary)
ageTo int Filters the "age" column (including the boundary)
qc_value float Filters the "qc_value" column" with exact match
qc_valueFrom float Filters the "qc_value" column (including the boundary)
qc_valueTo float Filters the "qc_value" column (including the boundary)
test_boolean_column boolean Filters the "test_boolean_column" column for a boolean value
nucleotideMutations list of strings Filters for nucleotide mutations, see mutation filters
aminoAcidMutations list of strings Filters for amino acid mutations, see mutation filters
nucleotideInsertions list of strings In the format ins_false{'<position>:<insertion>'}. Example: ins_100:AGG
aminoAcidInsertions list of strings In the format ins_<sequenceName>:<position><insertion>. Example: ins_E:100:DEF